Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015807564.1_cds_XP_016494880.1_9254
CDS Infomation

[gene=LOC107814064] [db_xref=GeneID:107814064] [protein=snRNA-activating protein complex subunit-like] [protein_id=XP_016494880.1] [location=complement(join(12446..12727,14404..14664,14762..14887,15516..15611,18948..19038,19162..19250,20039..20174,20873..20928,21082..21148,22067..22122,22380..22514))] [gbkey=CDS]
Sequence

ATGTCGGACCCTAAGGCTTCAGCAGATGAACACTATGTTTCCATTCCTCGCGGTGGCCCT
ATTTACATTTCCGACATGGTTGGTCCACTCACTAAGGTTGCTGACTTTGAGGTCAGCATC
TTCCGTGAACTTGAGCGGCTCAAGGCAGAGTTGTCCGTTGATTCACTTGAAATGTTTGAT
GATGAGATATCGGTTGAGGATCTTAAAACTTTCAGTGAAGAGGAATTGGTGGCTCAGGCC
TTTGAAGAAGCATTTAAGGACGATGAGCTGACCAAAGAATCTTCACAAACTTTGACAGAG
CACCTTGATACAAGGTCAGAAAGAGAAGTGGACTCTTCTACTATTCATGATCCCTCAGAC
AATGTCGCCCTCGACAACAAAGGCTCAGATAAACGCAAGTCCAACAAGAGGAAGCGGGGG
AAGAATGTTCGTCAGAAGAATGCTGTTGATGAAGACTATGTTCTGAAGGTGGAACAACTT
GCAAAAATTAAAGAAAAACAAGAGGAAGAGAAAGCAGCAGCAAGATTGCATTCTTTCAAT
GGTAGTTGCGGCAGCAGCCACTCTGCTTCAACATCTTCCAGTAAGAGTGGGAGAATGACA
TCACTCAAGTCAATAAGTTCGGGAACAAAGGTGAGGGCAGCAAATGCTCATGGACATATT
GCAGTGCATTTTCCAGAAGTTGTCCTCTGTATTGAGGTTTATCATTACAAAAAGACATGG
GTAAAAACGCAAGAATTTCTGGTCCTTGGGCGACAATTTTTGACGGAAATGAGAGACAAG
ATATATTGTATTACTGATGAGATAATGAAGAACACAGGCCAGAATGATCCTTCGGGCTAT
TTCCTTGTGGAGGATGTCTTTTGCAATGATTTTAGGCATCCTGCTGCTGTAAATTATAGT
AAGCCAATACTTAATTGGCTTCAAGATTCTAAGAGTGAGGCGCTGGAAAAATGGGAATCT
ATCGCCTCTGGTGAACTGCCACAGAAACAAAAGGCACTTTTAGGCAGTAAAATTGGACCA
CAATTGCCCCATTTCAAGACCGCTAAAATGCAAGTAACTCGTTTCTGTGACTTAAGATTT
CGACTTGGTTCTGGATATCTTTATTGTCACCAGGGGGATTGCAAGCATCAAGTTGTAATA
AGAGACATGAGGTTGATACATCCAGAGGACGTACAGAACCGAGCCGCTTATCCATTGATC
ACCTTTCAGCCGAAGTTGCGGTTCCAGAAATGCTCTGTTTGCAAGATTTTTAAAGCAGTT
AAGGTGACAGTTGATGATAAATGGGCTGCTGAAAATCCTTGCTACTTTTGTGACCTTTGC
TATTACATGCTCCACTATGTAAACGGGTCTCTGCTTTACGATGATTTCTCTGTGTATGAA
TATCTCCATGAGTAA

Peptide Sequence

PEP ID

XP_016494880.1
PEP Infomation

PREDICTED: snRNA-activating protein complex subunit-like [Nicotiana tabacum]
Sequence

MSDPKASADEHYVSIPRGGPIYISDMVGPLTKVADFEVSIFRELERLKAELSVDSLEMFD
DEISVEDLKTFSEEELVAQAFEEAFKDDELTKESSQTLTEHLDTRSEREVDSSTIHDPSD
NVALDNKGSDKRKSNKRKRGKNVRQKNAVDEDYVLKVEQLAKIKEKQEEEKAAARLHSFN
GSCGSSHSASTSSSKSGRMTSLKSISSGTKVRAANAHGHIAVHFPEVVLCIEVYHYKKTW
VKTQEFLVLGRQFLTEMRDKIYCITDEIMKNTGQNDPSGYFLVEDVFCNDFRHPAAVNYS
KPILNWLQDSKSEALEKWESIASGELPQKQKALLGSKIGPQLPHFKTAKMQVTRFCDLRF
RLGSGYLYCHQGDCKHQVVIRDMRLIHPEDVQNRAAYPLITFQPKLRFQKCSVCKIFKAV
KVTVDDKWAAENPCYFCDLCYYMLHYVNGSLLYDDFSVYEYLHE

Transcript Sequence

Gene sequence data has not been registered.